#gene_id transcript_id sprot_Top_BLASTX_hit RNAMMER prot_id prot_coords sprot_Top_BLASTP_hit Pfam SignalP TmHMM eggnog Kegg gene_ontology_blast gene_ontology_pfam transcript peptide AT1G01010.1 AT1G01010.1 sp|Q0WV96|NAC1_ARATH^sp|Q0WV96|NAC1_ARATH^Q:130-1416,H:1-429^100%ID^E:0^.^. . AT1G01010.1.p1 130-1419[+] sp|Q0WV96|NAC1_ARATH^sp|Q0WV96|NAC1_ARATH^Q:1-429,H:1-429^100%ID^E:0^.^. PF02365.14^NAM^No apical meristem (NAM) protein^5-137^E:1.1e-24 . ExpAA=18.92^PredHel=1^Topology=o411-428i . . . GO:0003677^molecular_function^DNA binding`GO:0006355^biological_process^regulation of transcription, DNA-templated . . AT1G01020.4 AT1G01020.4 . . AT1G01020.4.p1 560-1270[+] . PF04161.12^Arv1^Arv1-like family^40-184^E:1e-20 . ExpAA=134.86^PredHel=7^Topology=i5-24o28-50i71-90o105-127i140-162o167-184i204-226o . . . . . . AT1G01030.1 AT1G01030.1 sp|Q9MAN1|NGA3_ARATH^sp|Q9MAN1|NGA3_ARATH^Q:614-1687,H:1-358^100%ID^E:0^.^. . AT1G01030.1.p1 614-1690[+] sp|Q9MAN1|NGA3_ARATH^sp|Q9MAN1|NGA3_ARATH^Q:1-358,H:1-358^100%ID^E:0^.^. PF02362.20^B3^B3 DNA binding domain^56-159^E:2.7e-28 . . . . . GO:0003677^molecular_function^DNA binding . . AT1G01040.1 AT1G01040.1 sp|Q9SP32|DCL1_ARATH^sp|Q9SP32|DCL1_ARATH^Q:399-6125,H:1-1909^100%ID^E:0^.^. . AT1G01040.1.p1 399-6128[+] sp|Q9SP32|DCL1_ARATH^sp|Q9SP32|DCL1_ARATH^Q:1-1909,H:1-1909^100%ID^E:0^.^. PF00270.28^DEAD^DEAD/DEAH box helicase^252-413^E:3.2e-10`PF04851.14^ResIII^Type III restriction enzyme, res subunit^254-415^E:2e-13`PF00271.30^Helicase_C^Helicase conserved C-terminal domain^648-765^E:1.1e-16`PF03368.13^Dicer_dimer^Dicer dimerisation domain^840-928^E:9.4e-22`PF02170.21^PAZ^PAZ domain^1201-1338^E:3.7e-26`PF00636.25^Ribonuclease_3^Ribonuclease III domain^1375-1518^E:3.8e-29`PF14622.5^Ribonucleas_3_3^Ribonuclease-III-like^1573-1712^E:1.3e-14`PF00636.25^Ribonuclease_3^Ribonuclease III domain^1594-1707^E:6.4e-25`PF14709.6^DND1_DSRM^double strand RNA binding domain from DEAD END PROTEIN 1^1832-1904^E:1e-13`PF00035.25^dsrm^Double-stranded RNA binding motif^1834-1904^E:1.1e-09 . . . . . GO:0003676^molecular_function^nucleic acid binding`GO:0005524^molecular_function^ATP binding`GO:0003677^molecular_function^DNA binding`GO:0016787^molecular_function^hydrolase activity`GO:0016891^molecular_function^endoribonuclease activity, producing 5'-phosphomonoesters`GO:0005515^molecular_function^protein binding`GO:0004525^molecular_function^ribonuclease III activity`GO:0006396^biological_process^RNA processing . . AT2G02020.2 AT2G02020.2 sp|Q84WG0|PTR26_ARATH^sp|Q84WG0|PTR26_ARATH^Q:17-1588,H:1-545^93.03%ID^E:0^.^. . AT2G02020.2.p1 17-1591[+] sp|Q84WG0|PTR26_ARATH^sp|Q84WG0|PTR26_ARATH^Q:1-524,H:1-545^93.03%ID^E:0^.^. PF00854.20^PTR2^POT family^114-285^E:2.4e-64`PF00854.20^PTR2^POT family^312-478^E:3.8e-45 . ExpAA=186.34^PredHel=8^Topology=i111-133o153-175i201-223o228-250i376-398o413-435i455-477o497-519i . . . GO:0005215^molecular_function^transporter activity`GO:0006810^biological_process^transport`GO:0016020^cellular_component^membrane . . AT2G02023.1 AT2G02023.1 . . AT2G02023.1.p1 53-364[+] . . . . . . . . . . AT2G02090.1 AT2G02090.1 sp|Q9ZUL5|CHR19_ARATH^sp|Q9ZUL5|CHR19_ARATH^Q:259-2547,H:1-763^100%ID^E:0^.^. . AT2G02090.1.p1 259-2550[+] sp|Q9ZUL5|CHR19_ARATH^sp|Q9ZUL5|CHR19_ARATH^Q:1-763,H:1-763^100%ID^E:0^.^. PF04851.14^ResIII^Type III restriction enzyme, res subunit^213-386^E:8.8e-08`PF00176.22^SNF2_N^SNF2 family N-terminal domain^231-519^E:2.9e-55`PF00271.30^Helicase_C^Helicase conserved C-terminal domain^589-701^E:2.7e-19 . . . . . GO:0003677^molecular_function^DNA binding`GO:0005524^molecular_function^ATP binding`GO:0016787^molecular_function^hydrolase activity . . AT2G02100.1 AT2G02100.1 sp|Q39182|DEF02_ARATH^sp|Q39182|DEF02_ARATH^Q:219-449,H:1-77^100%ID^E:6e-33^.^. . . . . . . . . . . . . . AT2G02103.1 AT2G02103.1 sp|O04244|Y4200_ARATH^sp|O04244|Y4200_ARATH^Q:256-1098,H:6-313^49.68%ID^E:3e-68^.^. . AT2G02103.1.p1 1-1212[+] sp|O04244|Y4200_ARATH^sp|O04244|Y4200_ARATH^Q:86-366,H:6-313^51.95%ID^E:5e-75^.^. PF14111.5^DUF4283^Domain of unknown function (DUF4283)^32-170^E:1.8e-32`PF14392.5^zf-CCHC_4^Zinc knuckle^172-220^E:6.2e-19 . . . . . . . . AT2G02140.1 AT2G02140.1 sp|Q9ZUL8|DEF10_ARATH^sp|Q9ZUL8|DEF10_ARATH^Q:109-327,H:1-73^100%ID^E:6e-44^.^. . . . . . . . . . . . . . AT2G02148.3 AT2G02148.3 sp|Q56XX3|Y2215_ARATH^sp|Q56XX3|Y2215_ARATH^Q:195-1490,H:1-432^100%ID^E:0^.^. . AT2G02148.3.p1 195-1493[+] sp|Q56XX3|Y2215_ARATH^sp|Q56XX3|Y2215_ARATH^Q:1-432,H:1-432^100%ID^E:0^.^. . . . . . . . . . AT2G02160.1 AT2G02160.1 sp|Q9ZUM0|C3H17_ARATH^sp|Q9ZUM0|C3H17_ARATH^Q:233-2071,H:1-613^100%ID^E:0^.^. . AT2G02160.1.p1 233-2242[+] sp|Q9ZUM0|C3H17_ARATH^sp|Q9ZUM0|C3H17_ARATH^Q:1-669,H:1-669^100%ID^E:0^.^. PF15663.4^zf-CCCH_3^Zinc-finger containing family^32-84^E:1.2e-10`PF14608.5^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^34-55^E:0.37`PF14608.5^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^65-84^E:0.2`PF14608.5^zf-CCCH_2^RNA-binding, Nab2-type zinc finger^119-138^E:3.6 . . . . . . . . AT2G02170.2 AT2G02170.2 sp|Q9M2D8|Y3126_ARATH^sp|Q9M2D8|Y3126_ARATH^Q:1418-1783,H:83-205^40%ID^E:3e-06^.^. . AT2G02170.2.p1 359-1819[+] sp|Q9M2D8|Y3126_ARATH^sp|Q9M2D8|Y3126_ARATH^Q:364-482,H:96-212^39.5%ID^E:3e-15^.^. PF03763.12^Remorin_C^Remorin, C-terminal region^373-476^E:3.5e-33 . . . . . . . . AT2G02180.1 AT2G02180.1 sp|Q9ZUM2|TOM3_ARATH^sp|Q9ZUM2|TOM3_ARATH^Q:282-1190,H:1-303^100%ID^E:1e-178^.^. . AT2G02180.1.p1 282-1193[+] sp|Q9ZUM2|TOM3_ARATH^sp|Q9ZUM2|TOM3_ARATH^Q:1-303,H:1-303^100%ID^E:0^.^. PF06454.10^DUF1084^Protein of unknown function (DUF1084)^32-303^E:1.5e-144 . ExpAA=143.79^PredHel=6^Topology=i49-71o117-139i152-174o189-211i231-253o268-287i . . . . . . AT2G02220.1 AT2G02220.1 sp|Q9ZVR7|PSKR1_ARATH^sp|Q9ZVR7|PSKR1_ARATH^Q:278-3301,H:1-1008^100%ID^E:0^.^. . AT2G02220.1.p1 278-3304[+] sp|Q9ZVR7|PSKR1_ARATH^sp|Q9ZVR7|PSKR1_ARATH^Q:1-1008,H:1-1008^100%ID^E:0^.^. PF08263.11^LRRNT_2^Leucine rich repeat N-terminal domain^33-71^E:1.3e-09`PF13855.5^LRR_8^Leucine rich repeat^102-159^E:1.1e-06`PF00560.32^LRR_1^Leucine Rich Repeat^125-144^E:0.43`PF13855.5^LRR_8^Leucine rich repeat^441-491^E:1.2e-06`PF00560.32^LRR_1^Leucine Rich Repeat^467-486^E:1`PF13855.5^LRR_8^Leucine rich repeat^528-583^E:2.4e-08`PF00560.32^LRR_1^Leucine Rich Repeat^572-594^E:0.79`PF00069.24^Pkinase^Protein kinase domain^736-1003^E:2.3e-43`PF07714.16^Pkinase_Tyr^Protein tyrosine kinase^738-1003^E:1.8e-41`PF08263.11^LRRNT_2^Leucine rich repeat N-terminal domain^823-834^E:3100 sigP:1^25^0.77^YES ExpAA=26.23^PredHel=1^Topology=o658-680i . . . GO:0005515^molecular_function^protein binding`GO:0004672^molecular_function^protein kinase activity`GO:0005524^molecular_function^ATP binding`GO:0006468^biological_process^protein phosphorylation . .